Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866086.1_cds_XP_016432587.1_28816
CDS Infomation

[gene=LOC107759218] [db_xref=GeneID:107759218] [protein=3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like] [protein_id=XP_016432587.1] [location=join(1959..2956,3685..3866,4294..4640,4822..5064)] [gbkey=CDS]
Sequence

ATGGATGTCCGTCGGAGACCTCCCAAGCCTTCTCACCGGAATCACCATCTTCAACACCAC
CCTCAAAGAGCTTCCTCCGCCGCTCTCCGTCGTTCTCCTTCCCCTGCCCCTAAAGCTTCC
GATGCCCTTCCTCTCCCTTTATACCTAACCAACGGCATTTTCTTCACCCTCTTTTTTTCT
GTTGCTTATTACCTTCTACATCGATGGCGTGACAAGATCCGTAACTCCACCCCTCTCCAC
GTTGTTACTCTCTCCGAACTCGCCGCCATTCTCTCTCTCATTGCCTCTTTCATTTACCTC
CTTGGATTCTTCGGCATTGATTTTGTTCAGTCATTTATTGCACGTGCCTCTCACGACGCT
TGGGATATTGAAGACGAAGAGGAAAACAGTCGCTTCCTTCTCGACGAAGATCGCCGCCCC
CGCCGCCGACCTGTTCCTTGTCCCGCCGCCCTTGATAATTCCTCCATTTCGGCTCCTGTA
TCCAATTTTATGGATCCTCCGGTGTCTCTTCCCTCTCAGGACGACGAAGACCTTGTTAAA
TCCGTTGTTTCCGGTGACATTCCTTCGTATTCCCTTGAATCTAGGCTCGGAGATTGTTAC
CGAGCTGCTTCTGTTCGTCGTGAAGCGGTTCAGAGGATTACGGGGAGGTCTCTGACCGGT
TTACCACTTGACGGTTTTGATTACCAGTCGATTTTAGGGCAGTGCTGTGAGATGCCGATA
GGGTACGTTCAAATCCCAGTGGGGATTGCTGGGCCCTTGTTGCTTAACGGATGTGAATAT
TCCGTTCCCATGGCGACTACGGAAGGGTGTTTAGTTGCAAGTACTAACAGAGGTTGTAAG
GCTATTTATGCTTCTGGGGGAGCTACTAGCATTCTTTTTAGGGACGGGATGACGAGGGCT
CCAGTTGTGAAGTTCCCGACGGCCAGCAGGGCGTCGGAATTGTTCTTTTTCTTGGAGGAC
CCTGCTAATTTTGATACCTTAGCCATGGTTTTCAACAAATCCAGCAGATTTGCCAGGCTC
CAAAAGATTCAGTGCTCACTTGCAGGGAGAAATCTTTACATCAGGTTCAGCTGTGGCACG
GGGGATGCCATGGGAATGAACATGGTATCGAAAGGTGTTCAGAATGTTCTCGAGTTTCTT
CAGGATGAGTTCCCAGACATGGATGTAGTTGGTATATCTGGAAATTTCTGTTCTGATAAG
AAGCCTGCTGCTGTGAACTGGATTCAAGGGCGTGGAAAGTCAGTTGTCTGTGAAGCAATG
ATATCTGGAGAAGTGGTGGAGAAAGTATTGAAAACTTCTGTATCTGCTCTTGTAGAGCTG
AACACGATCAAGAATCTTACTGGCTCTGCTATTGCTGGTTCTCTTGGTGGGTTTAATGCC
CATGCTGCCAATATTGTCTCTGCCATTTTCATAGCCACTGGGCAGGATCCAGCACAAAAT
ATAGAGAGCTCTCATTGCATTACCATGATGGAGGCGATCAATGATGGAAAGGATATTCAC
GTATCCGTGACCATGCCTTGCATTGAGGTTGGTACTGTTGGTGGTGGGACTCAACTTGCT
TCTCAATCGGCCTGCCTGAATCTGCTCGGTGTTAAGGGTGCATGCAGAGAATCCCCTGCA
GCGAACTCGAGGCTCCTGGCAAACATAGTAGCGGGTTCTGTTTTGGCTGGGGAGCTGTCA
TTGATGTCTGCCATTGCAGCTGGTCAGCTTGTTAAAAGCCACATGAAATATAACAGATCA
AGCAGGGATATGAGCACAATTACCTCATAG

Peptide Sequence

PEP ID

XP_016432587.1
PEP Infomation

PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like [Nicotiana tabacum]
Sequence

MDVRRRPPKPSHRNHHLQHHPQRASSAALRRSPSPAPKASDALPLPLYLTNGIFFTLFFS
VAYYLLHRWRDKIRNSTPLHVVTLSELAAILSLIASFIYLLGFFGIDFVQSFIARASHDA
WDIEDEEENSRFLLDEDRRPRRRPVPCPAALDNSSISAPVSNFMDPPVSLPSQDDEDLVK
SVVSGDIPSYSLESRLGDCYRAASVRREAVQRITGRSLTGLPLDGFDYQSILGQCCEMPI
GYVQIPVGIAGPLLLNGCEYSVPMATTEGCLVASTNRGCKAIYASGGATSILFRDGMTRA
PVVKFPTASRASELFFFLEDPANFDTLAMVFNKSSRFARLQKIQCSLAGRNLYIRFSCGT
GDAMGMNMVSKGVQNVLEFLQDEFPDMDVVGISGNFCSDKKPAAVNWIQGRGKSVVCEAM
ISGEVVEKVLKTSVSALVELNTIKNLTGSAIAGSLGGFNAHAANIVSAIFIATGQDPAQN
IESSHCITMMEAINDGKDIHVSVTMPCIEVGTVGGGTQLASQSACLNLLGVKGACRESPA
ANSRLLANIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDMSTITS

Transcript Sequence

Gene sequence data has not been registered.